STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF53631.1Hypothetical protein; KEGG: mpi:Mpet_2337 2.5e-12 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 7.50. (261 aa)    
Predicted Functional Partners:
EGF54322.1
HRDC domain protein; KEGG: bcv:Bcav_2897 8.0e-223 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
   
  0.850
EGF54333.1
UvrD/REP helicase; KEGG: sen:SACE_1077 3.4e-96 ATP-dependent DNA helicase K01529; Psort location: Cytoplasmic, score: 7.50; overlaps another CDS with the same product name.
 
 
  0.699
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.672
EGF55598.1
Hypothetical protein; KEGG: ske:Sked_17440 1.6e-52 lauroyl/myristoyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.660
EGF54334.1
UvrD/REP helicase; KEGG: ske:Sked_27640 1.5e-173 DNA/RNA helicase, superfamily I; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97; overlaps another CDS with the same product name; Belongs to the helicase family. UvrD subfamily.
 
 
  0.609
EGF57310.1
Hypothetical protein; KEGG: nml:Namu_4885 3.1e-05 glycine oxidase ThiO; K03153 glycine oxidase; Psort location: Cytoplasmic, score: 7.50.
 
     0.598
EGF55597.1
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase; KEGG: cfl:Cfla_1787 6.6e-109 glycosyl transferase group 1; K08256 phosphatidylinositol alpha-mannosyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.592
EGF53628.1
tRNA methyltransferase complex GCD14 subunit; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
 
     0.581
EGF53632.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.572
EGF53625.1
Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family.
 
     0.566
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.