STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF53727.1SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 1.2e-47 membrane protease subunits, stomatin/prohibitin homologs. (436 aa)    
Predicted Functional Partners:
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.946
EGF53728.1
Nodulation efficiency protein D; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.901
EGF56745.1
Peptidase, S54 family; KEGG: pak:HMPREF0675_3333 3.8e-33 peptidase, S54 (rhomboid) family protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.775
EGF57046.1
Peptidase, M16 family; KEGG: jde:Jden_1026 2.3e-122 processing peptidase; Psort location: Cytoplasmic, score: 7.50; Belongs to the peptidase M16 family.
  
 0.564
EGF53726.1
RNA methyltransferase, TrmH family; KEGG: xce:Xcel_1436 2.7e-87 tRNA/rRNA methyltransferase (SpoU); K00599; Psort location: Cytoplasmic, score: 7.50.
   
   0.552
arc
Proteasome ATPase; KEGG: art:Arth_2173 4.1e-139 vesicle-fusing ATPase K13527; Psort location: CytoplasmicMembrane, score: 8.78.
   
   0.443
EGF53627.1
Proteasome ATPase; KEGG: art:Arth_2173 9.4e-117 vesicle-fusing ATPase K13527; Psort location: CytoplasmicMembrane, score: 8.78.
   
   0.443
EGF56627.1
Hypothetical protein.
  
    0.438
EGF53729.1
KEGG: kfl:Kfla_3702 1.1e-76 ABC transporter related protein; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.51.
       0.430
EGF50576.1
KEGG: aai:AARI_10020 3.1e-24 putative GNAT-family acetyltransferase; Psort location: CytoplasmicMembrane, score: 9.55.
  
    0.429
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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