STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF53774.1Conserved domain protein; KEGG: net:Neut_0770 1.6e-06 hemH; ferrochelatase K01772. (60 aa)    
Predicted Functional Partners:
EGF55724.1
KEGG: pak:HMPREF0675_3348 1.0e-73 hemG_1; protoporphyrinogen oxidase K00231; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.961
EGF57134.1
Hypothetical protein; KEGG: sti:Sthe_2947 6.4e-31 protoporphyrinogen oxidase; K00230 protoporphyrinogen oxidase; Psort location: CytoplasmicMembrane, score: 9.55.
    
 0.885
EGF55725.1
KEGG: cmi:CMM_0587 7.3e-94 hemE; uroporphyrinogen decarboxylase K01599; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.818
EGF55728.1
Chlorite O(2)-lyase; KEGG: pak:HMPREF0675_3351 3.6e-69 ferrochelatase K01772.
  
 
 0.770
EGF57814.1
Periplasmic binding protein.
  
    0.682
EGF53775.1
Conserved domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.639
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
 0.594
EGF58232.1
Conserved domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.533
EGF53773.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.424
EGF57944.1
KEGG: pac:PPA0304 2.7e-32 hemC; porphobilinogen deaminase K01749.
  
  
 0.414
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.