STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF52214.1Transcriptional regulator, GntR family; KEGG: ecm:EcSMS35_0123 3.5e-08 pdhR; transcriptional regulator PdhR K05799; Psort location: Cytoplasmic, score: 7.50. (281 aa)    
Predicted Functional Partners:
EGF52216.1
Tat pathway signal sequence domain protein; KEGG: oan:Oant_2957 9.1e-25 4-phytase K02035; Psort location: Cellwall, score: 9.21.
 
     0.867
EGF52215.1
Hypothetical protein.
       0.773
EGF52218.1
ABC transporter, ATP-binding protein; KEGG: reh:H16_B1125 3.8e-65 ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
     0.753
EGF56264.1
FCD domain protein; KEGG: ecf:ECH74115_0120 2.1e-18 pdhR; transcriptional regulator PdhR K05799; Psort location: Cytoplasmic, score: 7.50.
  
     0.747
EGF52224.1
KEGG: bcv:Bcav_3771 1.6e-89 dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DapA family.
 
   
 0.675
EGF49976.1
FCD domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.658
nanE
Putative ManNAc-6-P epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
   
 0.591
EGF52217.1
Putative glutathione ABC transporter, permease protein GsiC; KEGG: amt:Amet_2908 1.4e-49 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.543
EGF52219.1
KEGG: bsu:BSU11370 4.7e-60 appF; oligopeptide ABC transporter (ATP-binding protein) K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
     0.436
EGF57680.1
BNR/Asp-box repeat protein; KEGG: pac:PPA1560 2.6e-105 sialidase precursor K01186; Psort location: Extracellular, score: 9.98.
 
     0.426
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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