STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF51724.1KEGG: bpm:BURPS1710b_A2293 0.00065 TetR family transcriptional regulator K00356; Psort location: Cytoplasmic, score: 7.50. (206 aa)    
Predicted Functional Partners:
EGF51723.1
KEGG: xce:Xcel_2303 1.7e-135 glyceraldehyde-3-phosphate dehydrogenase, type I; Psort location: Cytoplasmic, score: 9.97.
       0.598
EGF56755.1
Transcriptional regulator, MarR family; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.530
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.