STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF50196.1YcaO-like family protein; KEGG: aeh:Mlg_1850 0.0040 RNase HII K03470; Psort location: Cytoplasmic, score: 7.50. (457 aa)    
Predicted Functional Partners:
EGF50198.1
Bacteriocin biosynthesis cyclodehydratase domain protein; KEGG: xce:Xcel_0254 0.0046 DNA polymerase III, subunits gamma and tau K02343; Psort location: Cytoplasmic, score: 7.50; overlaps another CDS with the same product name.
  
    0.886
EGF50197.1
Bacteriocin biosynthesis cyclodehydratase domain protein; Psort location: Cytoplasmic, score: 7.50; overlaps another CDS with the same product name.
       0.826
EGF50199.1
Conserved domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.826
EGF55949.1
CAAX amino terminal protease family protein; KEGG: gfo:GFO_0014 4.4e-16 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.725
EGF50201.1
Conserved domain protein; KEGG: ddd:Dda3937_01481 2.0e-12 membrane-fusion protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.593
EGF50203.1
Thiopeptide-type bacteriocin biosynthesis domain protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.532
EGF56200.1
Conserved domain protein; KEGG: csa:Csal_1592 1.5e-12 ribonuclease E K08300; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.530
EGF58035.1
Tetratricopeptide repeat protein; KEGG: scl:sce3123 1.1e-06 protein kinase; Psort location: Cytoplasmic, score: 7.50.
  
     0.528
EGF57438.1
Chain length determinant protein; KEGG: sce:YIR019C 2.2e-37 MUC1, FLO11, STA4; GPI-anchored cell surface glycoprotein (flocculin) required for pseudohyphal formation, invasive growth, flocculation, and biofilms; transcriptionally regulated by the MAPK pathway (via Ste12p and Tec1p) and the cAMP pathway (via Flo8p); K01178 glucoamylase; Psort location: Cellwall, score: 9.22.
  
     0.474
EGF55950.1
Nitroreductase family protein; KEGG: cti:RALTA_B0594 2.8e-21 putative oxidoreductase protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.464
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.