STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY30637.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
EHY30618.1
Hypothetical protein.
 
     0.878
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
   
 
 0.865
rpmA
Ribosomal protein L27; KEGG: apb:SAR116_1855 2.7e-23 ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.863
rpmF
Ribosomal protein L32; KEGG: apb:SAR116_0011 7.1e-09 ribosomal protein L32 K02911; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL32 family.
   
   0.857
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.855
rpmJ
Ribosomal protein L36; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL36 family.
  
   0.852
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
 
 0.850
rplQ
Ribosomal protein L17; KEGG: apb:SAR116_2416 1.5e-31 ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.849
rpsP
Ribosomal protein S16; KEGG: apb:SAR116_1817 5.1e-15 ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS16 family.
   
   0.849
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
   
   0.848
Your Current Organism:
Sutterella parvirubra
NCBI taxonomy Id: 762967
Other names: S. parvirubra YIT 11816, Sutterella parvirubra YIT 11816, Sutterella parvirubra str. YIT 11816, Sutterella parvirubra strain YIT 11816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.