STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH02018.1Hypothetical protein; KEGG: pmz:HMPREF0659_A7234 1.3e-41 phage lysozyme. (175 aa)    
Predicted Functional Partners:
EHH02019.1
Conjugative transposon protein TraQ family protein.
       0.783
EHH02020.1
CHC2 zinc finger domain protein; KEGG: lrl:LC705_01527 1.7e-11 dnaG; DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
       0.717
EHH02021.1
Hypothetical protein.
       0.713
EHH02022.1
Conjugative transposon TraN protein.
       0.713
EHH02023.1
Conjugative transposon TraM protein.
       0.572
EHH02024.1
Hypothetical protein.
       0.544
EHH02025.1
Conjugative transposon TraK protein.
       0.517
EHH02027.1
Conjugative transposon protein TraI.
       0.465
EHH02028.1
Hypothetical protein.
       0.463
EHH02026.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.462
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.