STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH02035.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (251 aa)    
Predicted Functional Partners:
EHH02027.1
Conjugative transposon protein TraI.
 
     0.807
EHH02030.1
Conjugative transposon protein TraF; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.795
EHH02026.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.793
EHH02034.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.776
EHH02036.1
Hypothetical protein.
       0.773
EHG99701.1
Hypothetical protein.
  
     0.764
EHH00224.1
Conjugative transposon TraM protein.
  
     0.761
EHH00168.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.752
EHH02039.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 1.3e-15 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.750
EHH02022.1
Conjugative transposon TraN protein.
 
     0.741
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.