STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH02062.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
EHH02063.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
       0.789
EHH02064.1
Hypothetical protein.
       0.741
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
     
 0.739
EHH02061.1
Hypothetical protein; KEGG: pfd:PFDG_03263 7.2e-05 conserved hypothetical protein; K02350 DNA polymerase zeta subunit; Psort location: Cytoplasmic, score: 8.96.
       0.732
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
    
  0.722
EHH02065.1
Hypothetical protein.
       0.561
EHH02060.1
KEGG: bth:BT_0105 3.5e-213 DNA topoisomerase I omega subunit; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.26.
       0.556
EHH01168.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: bvu:BVU_0979 5.4e-288 2-oxoglutarate synthase subunit KorA; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
     
 0.503
EHH02066.1
DNA binding domain, excisionase family.
       0.479
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.