STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01927.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (458 aa)    
Predicted Functional Partners:
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
 
     0.819
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
       0.685
EHH01888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.681
EHH01764.1
Hypothetical protein; Psort location: Periplasmic, score: 9.84.
  
     0.658
EHH01228.1
Hypothetical protein; KEGG: psl:Psta_2515 8.9e-18 lipolytic protein G-D-S-L family; K10804 acyl-CoA thioesterase I.
  
     0.654
EHH00603.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.629
EHH01889.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00257190 1.1e-06 TPR Domain containing protein; Psort location: OuterMembrane, score: 9.49.
  
     0.581
EHH01419.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
  
     0.563
EHH01928.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.522
EHG99224.1
GDSL-like protein; KEGG: rba:RB10144 1.6e-43 endo-1,4-beta-xylanase B.
  
     0.506
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.