STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01971.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.700
EHG99311.1
Clostripain family protein; KEGG: cpf:CPF_0840 2.8e-08 cloSI; alpha-clostripain K08587.
   
 
 0.676
EHH01747.1
Response regulator receiver domain protein; KEGG: dfe:Dfer_1574 2.3e-122 histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.668
EHH01639.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_0036 5.2e-132 two-component system sensor histidine kinase/response regulator hybrid K00936.
    
 0.668
EHH01210.1
Response regulator receiver domain protein; KEGG: dfe:Dfer_1574 8.6e-155 histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.668
EHH00773.1
Transcriptional regulator, AraC family; KEGG: dfe:Dfer_1574 6.6e-61 histidine kinase; Psort location: Cytoplasmic, score: 9.26.
    
 0.668
EHH00599.1
Two component regulator propeller; KEGG: dfe:Dfer_0792 7.9e-33 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
    
 0.668
EHH00631.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dfe:Dfer_1574 1.3e-135 histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.668
EHH00287.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dfe:Dfer_1574 3.1e-182 histidine kinase; Psort location: CytoplasmicMembrane, score: 7.88.
    
 0.618
EHH00322.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gfo:GFO_3052 3.6e-85 two-component system sensor histidine kinase/response regulator hybrid K00936; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.618
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.