STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01987.1ABC transporter, ATP-binding protein; KEGG: reh:H16_A2684 1.1e-90 sunT; peptide ABC transporter K06147; Psort location: CytoplasmicMembrane, score: 10.00. (687 aa)    
Predicted Functional Partners:
EHG99861.1
Hypothetical protein; KEGG: csh:Closa_2363 0.00063 ATP-dependent protease La; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.931
EHG99326.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.925
EHH01463.1
Peptidase, C39 family; Psort location: CytoplasmicMembrane, score: 9.16.
 
     0.782
EHH01319.1
Peptidase, C39 family; KEGG: npu:Npun_F3519 3.4e-06 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter.
 
     0.778
EHH01986.1
Hypothetical protein.
       0.773
EHH01467.1
ABC transporter, ATP-binding protein.
  
 
 
0.698
EHH01152.1
Putative lipid A export ATP-binding/permease protein MsbA; KEGG: bvu:BVU_1072 9.9e-280 ABC transporter ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 
0.698
EHH01002.1
Auxiliary transport protein, membrane fusion protein family protein.
  
 0.677
EHH00696.1
Hypothetical protein; KEGG: apb:SAR116_2008 3.5e-05 secretion protein HlyD; Psort location: Cytoplasmic, score: 8.96.
  
 0.677
EHG99217.1
ABC transporter, ATP-binding protein; KEGG: snc:HMPREF0837_11106 3.1e-102 ABC superfamily transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 
0.660
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.