STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01764.1Hypothetical protein; Psort location: Periplasmic, score: 9.84. (395 aa)    
Predicted Functional Partners:
EHG98242.1
KEGG: ttr:Tter_1501 1.1e-13 glycoside hydrolase family 38; K01191 alpha-mannosidase.
 
    0.804
EHH01228.1
Hypothetical protein; KEGG: psl:Psta_2515 8.9e-18 lipolytic protein G-D-S-L family; K10804 acyl-CoA thioesterase I.
  
     0.765
EHH00603.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.765
EHG99497.1
Hypothetical protein; KEGG: rba:RB10507 7.9e-81 alpha-glucosidase K01187; Psort location: Cytoplasmic, score: 8.96.
  
     0.669
EHH00374.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.668
EHH01500.1
Alpha-1,3-galactosidase A domain protein.
  
     0.663
EHH01927.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.658
EHH00575.1
Hypothetical protein; KEGG: rba:RB10507 9.9e-90 alpha-glucosidase K01187; Psort location: Cytoplasmic, score: 8.96.
  
     0.640
EHH01888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.618
EHG99041.1
Hypothetical protein.
  
     0.604
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.