STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01820.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (201 aa)    
Predicted Functional Partners:
ung-2
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.820
EHG98375.1
Hypothetical protein; KEGG: bfa:Bfae_21680 0.0059 argininosuccinate synthase K01940.
  
     0.773
EHH00832.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.730
EHG98806.1
Hypothetical protein.
  
   0.702
EHH01309.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 3.0e-12 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
  
     0.701
EHG99983.1
Tetratricopeptide repeat protein; KEGG: hha:Hhal_1093 0.0073 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; K02501 glutamine amidotransferase.
  
     0.697
EHH01185.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.690
EHH00536.1
Hypothetical protein.
 
     0.689
EHG99873.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.660
rimP
Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
  
    0.653
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.