STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01833.1KEGG: npu:Npun_F4823 3.1e-79 FeS assembly ATPase SufC K09013; Psort location: Cytoplasmic, score: 9.26. (251 aa)    
Predicted Functional Partners:
EHH01831.1
Cysteine desulfurase, SufS subfamily; KEGG: bvu:BVU_1360 1.2e-171 aminotransferase; K11717 cysteine desulfurase / selenocysteine lyase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.999
EHH01834.1
KEGG: apb:SAR116_0014 2.8e-179 FeS assembly protein SufB K09014.
 
 0.999
EHH01832.1
Putative FeS assembly protein SufD; KEGG: apb:SAR116_0016 8.2e-31 SufD, needed for FhuF Fe-S center production/stability K09015; Psort location: Cytoplasmic, score: 8.96.
 
 0.998
EHH02000.1
Putative FeS assembly SUF system protein; KEGG: mpl:Mpal_1220 7.8e-13 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 8.96.
  
 0.930
EHH00247.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.911
cysQ
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
      0.720
EHH00812.1
Fe-S metabolism associated domain protein; KEGG: alv:Alvin_1507 7.5e-20 cysteine desulfurase, SufS subfamily; K11717 cysteine desulfurase / selenocysteine lyase; Psort location: Cytoplasmic, score: 9.97.
 
   0.667
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
  
 0.558
EHH01835.1
CvpA family protein; KEGG: krh:KRH_04540 8.0e-06 S1C family peptidase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.537
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
       0.537
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.