STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01852.1Glycerophosphodiester phosphodiesterase family protein; KEGG: bth:BT_0195 2.3e-67 glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 9.97. (297 aa)    
Predicted Functional Partners:
EHH01760.1
KEGG: pdi:BDI_0402 1.1e-60 putative glycerophosphodiester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase.
  
  
 
0.636
EHG99106.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
      0.566
EHH01355.1
Hypothetical protein; KEGG: fpl:Ferp_1839 0.00025 CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.542
crcB
Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
  
    0.530
EHH01755.1
KEGG: bvu:BVU_1493 1.7e-149 alkaline phosphatase III precursor; K01077 alkaline phosphatase; Psort location: Periplasmic, score: 10.00; Belongs to the alkaline phosphatase family.
   
 
 0.526
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.525
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.508
EHH01851.1
Methyltransferase domain protein; KEGG: pde:Pden_2589 6.4e-10 3-demethylubiquinone-9 3-methyltransferase K00568; Psort location: Cytoplasmic, score: 8.96.
       0.491
EHH01696.1
Ser/Thr phosphatase family protein.
  
 
 0.472
EHH01686.1
HAD hydrolase, family IA, variant 3.
 
  
  0.468
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.