STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01884.1SusD family protein; Psort location: Cytoplasmic, score: 8.96. (608 aa)    
Predicted Functional Partners:
EHH01883.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 7.0e-06 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
     0.927
EHH00852.1
FG-GAP repeat protein; KEGG: npu:Npun_F4869 3.7e-07 putative outer membrane adhesin like proteiin.
 
 0.905
EHH01882.1
Hypothetical protein.
 
     0.880
EHH01879.1
M6 family metalloprotease domain protein; KEGG: pin:Ping_2144 2.2e-12 peptidase M6, immune inhibitor A; K09607 immune inhibitor A; Psort location: OuterMembrane, score: 9.49.
 
  
  0.819
EHH01234.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
 
 
   0.795
EHH01217.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
  
 
   0.794
EHH01601.1
TonB-dependent receptor.
 
 
   0.771
EHH00585.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
 
 
   0.765
EHG99134.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
 
 
   0.753
EHH01289.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
 
   0.747
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.