STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01891.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (432 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.865
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.838
EHH01890.1
Glycosyltransferase, group 2 family protein; KEGG: gfo:GFO_0844 3.4e-89 transmembrane family-2 glycosyl transferase K00786; Psort location: CytoplasmicMembrane, score: 10.00.
       0.791
EHH01889.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00257190 1.1e-06 TPR Domain containing protein; Psort location: OuterMembrane, score: 9.49.
       0.785
EHH01168.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: bvu:BVU_0979 5.4e-288 2-oxoglutarate synthase subunit KorA; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.601
EHH01888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.546
EHH01887.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.545
EHH01085.1
TonB family domain protein.
    
  0.408
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.