STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01731.1KEGG: bde:BDP_1386 1.2e-38 hydrolase (HAD superfamily) K07024; Psort location: Cytoplasmic, score: 8.96. (263 aa)    
Predicted Functional Partners:
EHH01732.1
Hypothetical protein.
       0.773
EHH01305.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.722
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.624
EHH01027.1
Hypothetical protein.
  
     0.535
EHG99499.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.487
EHH00427.1
Hypothetical protein.
  
     0.471
EHG98730.1
KEGG: bth:BT_0373 3.3e-91 mannose-6-phosphate isomerase; K01809 mannose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.461
EHG99203.1
Trehalose-phosphatase; KEGG: bvu:BVU_3259 8.8e-288 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; K00697 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Psort location: Cytoplasmic, score: 9.97.
    
 0.457
EHH01685.1
KEGG: bth:BT_2543 9.1e-80 riboflavin biosynthesis protein RibF, putative riboflavin kinase; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 9.97.
   
 0.452
EHH01730.1
Fasciclin domain protein.
  
    0.446
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.