STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01620.1Transport energizing protein, ExbD/TolR family; KEGG: apb:SAR116_2297 3.6e-05 TolR protein K03559. (141 aa)    
Predicted Functional Partners:
EHH01622.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: hip:CGSHiEE_01075 2.7e-06 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.985
EHH01097.1
Transporter, MotA/TolQ/ExbB proton channel family protein.
 
 
 0.864
EHH01621.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    
0.788
EHH01619.1
KEGG: fgr:FG06804.1 0.0015 hypothetical protein; K11594 ATP-dependent RNA helicase.
       0.773
EHH01623.1
Hypothetical protein.
       0.773
EHG98106.1
Hypothetical protein; KEGG: gbe:GbCGDNIH1_2206 0.0099 oxidoreductase K00100; Psort location: CytoplasmicMembrane, score: 9.86.
  
 
 0.749
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
 0.748
EHH01085.1
TonB family domain protein.
  
   0.670
EHH01959.1
TonB family domain protein.
   
   0.668
EHH01100.1
TonB family domain protein.
   
   0.668
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.