STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01628.1Hypothetical protein; KEGG: pop:POPTR_219715 0.0083 hypothetical protein; K05310 ethanolaminephosphotransferase. (570 aa)    
Predicted Functional Partners:
EHH01631.1
Hypothetical protein.
 
     0.917
EHH01633.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.875
EHH01629.1
F5/8 type C domain protein.
 
    0.869
EHH01637.1
SusD family protein.
 
     0.859
EHH01638.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
 
     0.843
EHH01634.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
 
     0.837
EHH01630.1
Hypothetical protein.
      
0.736
EHH01632.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.727
EHH01626.1
Hypothetical protein.
       0.697
EHH01627.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.697
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.