STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01542.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
EHH01543.1
Carbohydrate binding domain protein; KEGG: chu:CHU_2528 2.4e-16 hypothetical protein K01238.
       0.572
EHH01538.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
       0.517
EHH01539.1
Hypothetical protein.
       0.517
EHH01540.1
Hypothetical protein.
       0.517
EHH01541.1
Hypothetical protein.
       0.517
EHH01544.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.431
EHH01545.1
Hypothetical protein; KEGG: tva:TVAG_387410 2.9e-23 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; overlaps another CDS with the same product name.
       0.431
EHH01546.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
       0.431
EHH01547.1
Hypothetical protein.
       0.431
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.