STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01465.1Hypothetical protein; Psort location: OuterMembrane, score: 9.52. (767 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.641
EHG98444.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.625
EHG99119.1
Hypothetical protein.
  
 
  0.589
EHH00536.1
Hypothetical protein.
  
     0.573
EHH01464.1
Hypothetical protein.
       0.561
EHH00046.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.558
EHH00645.1
Hypothetical protein.
 
 
 
  0.548
EHH01988.1
Hypothetical protein.
 
 
 
  0.546
EHG99347.1
Outer membrane protein, OMP85 family; Psort location: OuterMembrane, score: 9.49.
  
     0.543
EHH01164.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: mmb:Mmol_2153 0.0016 exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III.
  
     0.534
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.