STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01419.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96. (201 aa)    
Predicted Functional Partners:
EHH01418.1
Hypothetical protein.
       0.786
EHH01417.1
4Fe-4S binding domain protein; KEGG: mfs:MFS40622_0136 6.6e-06 4Fe-4S ferredoxin iron-sulfur binding domain protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta; Psort location: Cytoplasmic, score: 8.96.
  
    0.780
EHG98715.1
Transcriptional regulator, AraC family; KEGG: lla:L0149 1.8e-10 adaA; methylphosphotriester-DNA alkyltransferase; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.570
EHH01927.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.563
EHH01288.1
Hypothetical protein.
  
     0.556
EHH01027.1
Hypothetical protein.
  
     0.554
EHH00374.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.548
EHH01691.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
     0.543
EHH01420.1
KEGG: fsu:Fisuc_0604 9.0e-73 chloramphenicol acetyltransferase; K00638 chloramphenicol O-acetyltransferase.
       0.494
EHH01289.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
     0.469
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.