STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01342.1Signal peptide peptidase SppA; KEGG: bth:BT_1879 4.8e-145 protease IV; K04773 protease IV; Psort location: CytoplasmicMembrane, score: 9.82. (587 aa)    
Predicted Functional Partners:
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
       0.820
EHH01344.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; KEGG: bfs:BF3274 3.6e-108 punA, deoD, pnp; purine nucleoside phosphorylase K03783; Psort location: Cytoplasmic, score: 8.96.
       0.820
thiL
Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.767
EHH01340.1
Hypothetical protein; KEGG: fra:Francci3_2649 8.1e-40 hypothetical protein K01854; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
       0.485
EHH01341.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.
       0.485
EHH01785.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 4.2e-10 DNA polymerase family B containing protein K02350; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.482
EHH00014.1
L-asparaginase, type I; KEGG: bth:BT_0526 1.4e-140 L-asparaginase I; K01424 L-asparaginase; Psort location: Cytoplasmic, score: 9.97.
      0.419
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.