STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01334.1Glycosyl hydrolase, family 31; KEGG: ccs:CCNA_00831 9.8e-130 alpha-glucosidase K01811; Psort location: Periplasmic, score: 9.83; Belongs to the glycosyl hydrolase 31 family. (687 aa)    
Predicted Functional Partners:
EHH01335.1
Glycosyl hydrolase, family 43; KEGG: scl:sce4598 6.2e-97 xynD; endo-1,4-beta-xylanase; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 43 family.
      0.625
EHH00238.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
   0.561
EHG99935.1
Fructose-1,6-bisphosphate aldolase, class II; KEGG: bfr:BF3299 3.5e-165 fructose-bisphosphate aldolase K01624; Psort location: Cytoplasmic, score: 9.97.
   
   0.561
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
   
   0.561
EHG99000.1
DnaJ domain protein; KEGG: apb:SAR116_1614 4.2e-36 molecular chaperone, DnaJ family K03686; Psort location: Cytoplasmic, score: 9.26.
   
   0.561
EHG98246.1
DnaJ domain protein; Psort location: CytoplasmicMembrane, score: 7.88.
   
   0.561
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
   0.555
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
    
   0.550
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
    
   0.550
rpmA
Ribosomal protein L27; KEGG: apb:SAR116_1855 1.7e-21 ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family.
    
   0.550
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.