STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01127.1KEGG: bmq:BMQ_2938 1.7e-53 nitroreductase family protein K07078; Psort location: Cytoplasmic, score: 8.96. (200 aa)    
Predicted Functional Partners:
EHH01125.1
Hypothetical protein.
       0.773
EHH01126.1
Cyclic nucleotide-binding domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EHH01124.1
Carbohydrate kinase, FGGY family protein; KEGG: bvu:BVU_3954 1.9e-198 xylulose kinase; K00854 xylulokinase; Psort location: Cytoplasmic, score: 9.26.
       0.570
xylA
Xylose isomerase; KEGG: bth:BT_0793 5.9e-211 xylose isomerase K01805; Psort location: Cytoplasmic, score: 9.97; Belongs to the xylose isomerase family.
       0.475
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.