STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01130.1KEGG: srm:SRM_02163 3.6e-76 GH3; GH3 auxin-responsive promoter superfamily; Psort location: Cytoplasmic, score: 8.96. (509 aa)    
Predicted Functional Partners:
EHH01128.1
Hypothetical protein.
 
  
  0.832
EHH01129.1
Hypothetical protein.
       0.777
EHG98213.1
Hypothetical protein; KEGG: fps:FP2468 5.9e-09 paaE; phenylacetic acid degradation NADH oxidoreductase PaaE K02613.
  
 
 0.761
EHG99963.1
Chain length determinant protein; KEGG: cpi:Cpin_4764 2.5e-109 capsular exopolysaccharide family; Psort location: CytoplasmicMembrane, score: 7.88.
    
  0.696
EHH00842.1
KEGG: bvu:BVU_1187 3.1e-102 uroporphyrinogen-III synthase; K01719 uroporphyrinogen-III synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.688
EHH00044.1
Hypothetical protein; KEGG: bse:Bsel_1765 0.00013 CheA signal transduction histidine kinase K03407.
 
     0.679
EHG98823.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.638
EHG99053.1
Hypothetical protein.
  
     0.605
EHG98926.1
DoxX family protein; KEGG: pmz:HMPREF0659_A5471 5.4e-16 tpiA; triose-phosphate isomerase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.600
EHH00483.1
Hypothetical protein.
  
     0.572
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.