STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01138.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
EHH01139.1
Hypothetical protein; KEGG: pha:PSHAa2319 0.00037 3-deoxy-D-manno-octulosonic-acid kinase; K11211 3-deoxy-D-manno-octulosonic acid kinase; Psort location: Cytoplasmic, score: 8.96.
    
  0.786
EHH01140.1
Glycosyltransferase, group 2 family protein; KEGG: mmg:MTBMA_c06250 5.1e-38 glycosyltransferase.
       0.779
EHH01137.1
UDP-galactopyranose mutase; KEGG: bvu:BVU_1063 2.9e-170 putative LPS biosynthesis related UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase; Psort location: Cytoplasmic, score: 8.96.
  
    0.739
EHH01136.1
KEGG: bvu:BVU_1062 3.8e-104 putative acetyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.686
EHH01135.1
Hypothetical protein.
       0.515
EHH01134.1
4-phosphoerythronate dehydrogenase family protein; KEGG: bfs:BF0181 5.2e-61 pdxB; erythronate-4-phosphate dehydrogenase; K03473 erythronate-4-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.440
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.