STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01159.1Arylsulfatase; KEGG: vex:VEA_003619 1.3e-46 phosphoglycerol transferase I; Psort location: CytoplasmicMembrane, score: 10.00. (605 aa)    
Predicted Functional Partners:
EHH01160.1
Putative ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
       0.678
argS
arginine--tRNA ligase; KEGG: bfs:BF4219 3.5e-252 argS; arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
  
    0.653
EHH00390.1
Ser/Thr phosphatase family protein; KEGG: nam:NAMH_0111 0.00029 phosphodiesterase K07095; Psort location: Cytoplasmic, score: 8.96.
  
     0.534
EHG98714.1
PAP2 family protein; KEGG: gfo:GFO_3394 0.00070 secreted PAP2 superfamily protein K01112; Psort location: OuterMembrane, score: 9.49.
 
   
 0.514
EHH01162.1
DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.437
EHG98861.1
Putative membrane protein.
  
     0.410
EHG99891.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.403
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.