STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01168.12-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: bvu:BVU_0979 5.4e-288 2-oxoglutarate synthase subunit KorA; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96. (615 aa)    
Predicted Functional Partners:
EHH01720.1
Thiamine pyrophosphate enzyme, TPP binding domain protein; KEGG: bfs:BF1653 1.5e-118 putative 2-oxoglutarate synthase subunit; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 
 0.999
EHH01169.1
KEGG: bvu:BVU_0978 1.2e-164 2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Psort location: Cytoplasmic, score: 8.96.
 0.999
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 0.999
EHH00025.1
4Fe-4S binding domain protein; KEGG: eci:UTI89_C2483 4.0e-16 napG; quinol dehydrogenase periplasmic component K02573; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.985
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.973
EHH01717.1
4Fe-4S binding domain protein; KEGG: bvu:BVU_2314 1.8e-28 hypothetical protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
  
 0.956
EHH01718.1
KEGG: pmz:HMPREF0659_A5966 1.2e-150 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) K00174; Psort location: Cytoplasmic, score: 8.96.
 
0.955
EHH01721.1
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit; KEGG: bfr:BF1645 2.0e-75 ketoisovalerate oxidoreductase subunit VorA; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
  
 0.949
EHH01364.1
Malate dehydrogenase; KEGG: bth:BT_1969 0. malic enzyme K00029; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.946
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
  
 
 0.940
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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