STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01181.1Nuclease, EndA/NucM family; KEGG: fps:FP0696 6.1e-58 extracellular ribonuclease precursor. (572 aa)    
Predicted Functional Partners:
EHH01101.1
Hypothetical protein.
  
     0.626
EHH01182.1
Hypothetical protein.
       0.568
EHH01879.1
M6 family metalloprotease domain protein; KEGG: pin:Ping_2144 2.2e-12 peptidase M6, immune inhibitor A; K09607 immune inhibitor A; Psort location: OuterMembrane, score: 9.49.
  
     0.521
EHH00311.1
TonB-dependent receptor plug domain protein; KEGG: ddd:Dda3937_04300 0.00012 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 9.49.
  
     0.516
EHG98806.1
Hypothetical protein.
  
     0.516
EHH01183.1
KEGG: cch:Cag_1518 7.6e-163 GTP-binding protein TypA K06207; Psort location: CytoplasmicMembrane, score: 7.88.
       0.490
EHH00933.1
Two component regulator propeller; KEGG: dfe:Dfer_1574 0.0011 histidine kinase; Psort location: Extracellular, score: 9.64.
  
     0.476
EHH01189.1
KEGG: pmz:HMPREF0659_A6937 9.4e-62 M6 family metalloprotease domain protein.
 
     0.440
EHG99577.1
Hypothetical protein; KEGG: bcl:ABC1445 3.5e-16 5'-nucleotidase K01081.
 
   
 0.429
EHG99933.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
 
     0.425
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.