STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01243.1Acyltransferase; KEGG: ddd:Dda3937_04140 3.6e-21 integral membrane protein; Psort location: CytoplasmicMembrane, score: 10.00. (364 aa)    
Predicted Functional Partners:
EHH01244.1
FG-GAP repeat protein; KEGG: rba:RB105 5.9e-07 cysteine proteinase K01376.
       0.553
EHH01245.1
Glycosyl hydrolase, family 43; KEGG: sli:Slin_4788 9.3e-94 xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
       0.553
EHH02056.1
Hypothetical protein.
  
    0.527
EHH00374.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.509
EHH01927.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.504
EHH00603.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.477
EHG99955.1
KEGG: pmz:HMPREF0659_A6458 2.0e-75 glycosyltransferase, group 4 family; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.475
EHG98628.1
Hypothetical protein.
  
     0.435
EHH02052.1
KEGG: chu:CHU_0837 0.00076 hypothetical protein K01238; Psort location: Extracellular, score: 9.65.
  
     0.430
EHH01870.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.409
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.