STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01300.1Death-on-curing family protein. (153 aa)    
Predicted Functional Partners:
EHH01301.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.794
EHH01693.1
Hypothetical protein.
 
     0.602
EHH01692.1
DNA-binding helix-turn-helix protein.
  
     0.421
EHH01302.1
comF family protein; KEGG: chu:CHU_3495 8.1e-24 purF; amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 9.97.
       0.421
EHH01410.1
UvrD/REP helicase; KEGG: kpe:KPK_1173 4.2e-26 helicase, UvrD/REP family; Psort location: Cytoplasmic, score: 9.97.
  
     0.406
EHH01902.1
Fic family protein.
 
     0.401
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.