STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01311.1Outer membrane protein; KEGG: tva:TVAG_304280 0.00038 hypothetical protein; K02152 V-type H+-transporting ATPase subunit G. (165 aa)    
Predicted Functional Partners:
EHH01310.1
Outer membrane protein; KEGG: gka:GK3362 0.0019 F0F1 ATP synthase subunit B K02109.
 
     0.872
EHH01307.1
Hypothetical protein.
 
 
   0.802
EHH01309.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 3.0e-12 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
 
    0.801
EHH00536.1
Hypothetical protein.
  
     0.733
EHH00539.1
Hypothetical protein.
  
    0.706
EHH00832.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.659
EHH00816.1
TonB-dependent receptor.
  
     0.646
EHG99347.1
Outer membrane protein, OMP85 family; Psort location: OuterMembrane, score: 9.49.
  
    0.646
EHH01312.1
Outer membrane protein.
 
    
0.645
EHG99983.1
Tetratricopeptide repeat protein; KEGG: hha:Hhal_1093 0.0073 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; K02501 glutamine amidotransferase.
  
    0.641
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.