STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01323.1Efflux ABC transporter, permease protein; KEGG: apb:SAR116_0522 1.1e-26 ABC-type transport system, permease component K09808; Psort location: CytoplasmicMembrane, score: 10.00. (409 aa)    
Predicted Functional Partners:
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  0.955
EHG99341.1
Efflux ABC transporter, permease protein; KEGG: eam:EAMY_1524 4.1e-19 ycfW; lipoprotein releasing system, transmembrane protein K09808; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.893
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.820
EHH01773.1
KEGG: bfr:BF2156 3.8e-58 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
  0.790
EHG99768.1
KEGG: bfr:BF2156 1.4e-76 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.790
EHG99258.1
KEGG: bfr:BF2156 1.1e-81 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
  0.790
EHH01325.1
O-methyltransferase; KEGG: bfs:BF4276 1.2e-86 putative O-methyltransferase; K00599; Psort location: Cytoplasmic, score: 9.97.
       0.788
EHG99748.1
Hypothetical protein.
 
 
 
 0.782
EHH01326.1
Pyruvate kinase; KEGG: bvu:BVU_0876 2.7e-213 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 9.97.
       0.764
EHH01309.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 3.0e-12 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
 
     0.734
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.