STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01006.1Arylsulfatase. (662 aa)    
Predicted Functional Partners:
EHH00869.1
OmpA family protein; KEGG: ctt:CtCNB1_3941 0.0010 cytochrome c oxidase, subunit II; K02275 cytochrome c oxidase subunit II; Psort location: OuterMembrane, score: 9.93.
  
     0.660
EHH00870.1
OmpA family protein; KEGG: bxe:Bxe_A4171 0.00020 putative cytochrome c oxidase K02275; Psort location: OuterMembrane, score: 10.00.
  
     0.598
EHH01005.1
Hypothetical protein.
       0.594
EHH02052.1
KEGG: chu:CHU_0837 0.00076 hypothetical protein K01238; Psort location: Extracellular, score: 9.65.
  
     0.510
EHH02056.1
Hypothetical protein.
  
     0.510
EHH02053.1
Hypothetical protein; Psort location: Extracellular, score: 9.65.
  
     0.453
EHH01004.1
Hypothetical protein.
       0.449
EHG98267.1
Hypothetical protein; KEGG: edi:EDI_341030 7.4e-22 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 9.97.
  
    0.442
EHH02057.1
Transcriptional regulator, AraC family; KEGG: bpb:bpr_I2255 8.3e-08 leuA; 2-isopropylmalate synthase LeuA K01649; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.402
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.