STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01050.1Putative glutaconyl-CoA decarboxylase subunit gamma. (147 aa)    
Predicted Functional Partners:
EHG98870.1
Putative acetyl-CoA carboxylase, biotin carboxyl carrier protein.
 
0.998
EHH01052.1
Carboxyl transferase domain protein.
 
 0.952
EHH01049.1
glutaconyl-CoA decarboxylase subunit beta.
 
  
  0.948
EHH00630.1
KEGG: bvu:BVU_3787 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 0.924
EHH00313.1
Carboxyl transferase domain protein; KEGG: bfs:BF3128 1.8e-241 mmdA; putative methylmalonyl-CoA decarboxylase, alpha-subunit; Psort location: Cytoplasmic, score: 9.97.
 
 0.877
EHG99489.1
KEGG: pmz:HMPREF0659_A5436 3.1e-63 biotin--[acetyl-CoA-carboxylase] ligase K03524; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.872
EHG98970.1
Carboxyl transferase domain protein.
 
 0.870
EHH01051.1
Hypothetical protein.
    
  0.812
EHH00555.1
KEGG: bvu:BVU_4007 0. glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain.
     
 0.801
EHH00044.1
Hypothetical protein; KEGG: bse:Bsel_1765 0.00013 CheA signal transduction histidine kinase K03407.
   
  0.787
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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