STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01063.1Hypothetical protein. (1395 aa)    
Predicted Functional Partners:
EHH00852.1
FG-GAP repeat protein; KEGG: npu:Npun_F4869 3.7e-07 putative outer membrane adhesin like proteiin.
  
 0.784
EHH01062.1
Hypothetical protein.
       0.532
EHH01061.1
OmpA family protein.
   
  0.505
EHH01064.1
Hypothetical protein.
       0.491
EHG98794.1
Carbohydrate binding module.
    
  0.434
EHG99747.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.9e-94 DNA segregation ATPase FtsK/SpoIIIE related protein K03466; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.420
EHG99783.1
Putative dnd system-associated protein 2; Psort location: Cytoplasmic, score: 8.96.
    
   0.420
EHG99907.1
Hypothetical protein; KEGG: snc:HMPREF0837_11342 0.00044 iga; IgA-specific metalloendopeptidase; Psort location: OuterMembrane, score: 9.52.
    
 0.417
EHH01084.1
OmpA family protein.
  
  0.410
EHH01666.1
Hypothetical protein; KEGG: cja:CJA_0170 2.8e-18 urh105A; unsaturated rhamnogalacturonyl hydrolase, putative, urh105A; Psort location: Cytoplasmic, score: 8.96.
    
   0.403
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.