STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH01080.1Glycosyl hydrolase, family 43. (826 aa)    
Predicted Functional Partners:
EHG99561.1
Glycosyl hydrolase, family 43; KEGG: afm:AFUA_2G04480 1.4e-37 xylosidase/arabinosidase K01238; Belongs to the glycosyl hydrolase 43 family.
 
  
 
0.929
EHH00093.1
Glycosyl hydrolase family 10.
 
  
  0.669
EHH00152.1
Glycosyl hydrolase, family 43; KEGG: cja:CJA_3018 8.6e-68 gly43N; beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N.
 
  
 
0.562
EHH00627.1
Hypothetical protein; KEGG: bpb:bpr_I1784 2.4e-17 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 43 family.
 
  
 
0.548
EHG99426.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.540
EHG98836.1
GDSL-like protein; KEGG: aca:ACP_0560 3.2e-45 rha1; rhamnogalacturonan acetylesterase; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.535
EHH00741.1
Hypothetical protein; KEGG: fsu:Fisuc_2943 2.1e-11 glucuronoarabinoxylan endo-1,4-beta-xylanase.
   
 
  0.530
EHG99224.1
GDSL-like protein; KEGG: rba:RB10144 1.6e-43 endo-1,4-beta-xylanase B.
     
  0.528
EHG98957.1
GDSL-like protein.
  
  
  0.512
EHH01079.1
Hypothetical protein.
       0.498
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.