STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00870.1OmpA family protein; KEGG: bxe:Bxe_A4171 0.00020 putative cytochrome c oxidase K02275; Psort location: OuterMembrane, score: 10.00. (393 aa)    
Predicted Functional Partners:
EHH01220.1
Fasciclin domain protein.
  
     0.708
EHG98267.1
Hypothetical protein; KEGG: edi:EDI_341030 7.4e-22 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 9.97.
  
     0.673
EHH00046.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
   0.665
EHG99176.1
Phosphate-selective porin O and P.
  
     0.665
EHH01107.1
Hypothetical protein.
  
     0.662
EHH00370.1
Phosphate-selective porin O and P.
  
     0.662
EHG99910.1
Hypothetical protein.
  
    0.656
EHH02053.1
Hypothetical protein; Psort location: Extracellular, score: 9.65.
  
 
  0.648
EHG99735.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.646
EHH01219.1
Fasciclin domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.645
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.