STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00893.1Hypothetical protein. (1175 aa)    
Predicted Functional Partners:
EHH00894.1
Hypothetical protein.
       0.572
EHH00895.1
Hypothetical protein.
       0.572
EHH00380.1
Tetratricopeptide repeat protein; KEGG: dsh:Dshi_1167 0.00081 peptidase M48 Ste24p; Psort location: Cytoplasmic, score: 8.96.
   
  0.519
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
       0.453
menD
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.
       0.453
EHH00891.1
KEGG: bfs:BF1300 1.1e-81 isochorismate synthase; K02361 isochorismate synthase; Psort location: Cytoplasmic, score: 8.96.
       0.453
EHH00892.1
Cof-like hydrolase; KEGG: btk:BT9727_5077 1.8e-51 HAD superfamily hydrolase K07024; Psort location: Cytoplasmic, score: 8.96.
       0.453
EHH00888.1
Hypothetical protein.
       0.406
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.