STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00772.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (586 aa)    
Predicted Functional Partners:
EHH00771.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EHG98937.1
Alpha-L-arabinofuranosidase.
  
     0.733
EHH00837.1
Carbohydrate binding domain protein; KEGG: pru:PRU_0525 1.1e-186 alpha-N-arabinofuranosidase.
  
     0.674
EHH00580.1
Alpha-L-fucosidase; KEGG: pru:PRU_2780 4.0e-141 family 29 glycosyl hydrolase; K01206 alpha-L-fucosidase.
  
     0.641
EHG98817.1
Alpha-L-fucosidase; KEGG: bth:BT_3665 4.9e-175 alpha-L-fucosidase precursor; K01206 alpha-L-fucosidase; Psort location: Periplasmic, score: 9.84.
  
     0.630
EHH00594.1
Alpha-L-arabinofuranosidase; KEGG: dtu:Dtur_1739 6.2e-136 alpha-N-arabinofuranosidase.
  
     0.625
EHH01750.1
Alpha-L-rhamnosidase protein; KEGG: bth:BT_2523 0. alpha-rhamnosidase; K05989 alpha-L-rhamnosidase.
  
    0.607
EHG99521.1
KEGG: fjo:Fjoh_3113 6.6e-148 alpha-N-arabinofuranosidase K01209.
  
     0.533
EHH00769.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.513
EHH00770.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.513
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.