STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00670.1Histidine kinase. (357 aa)    
Predicted Functional Partners:
EHH00669.1
LytTr DNA-binding domain protein.
 
 0.989
EHH00671.1
Efflux ABC transporter, permease protein.
 
     0.824
EHH00672.1
ABC transporter, ATP-binding protein.
 
     0.807
EHH00673.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.796
EHH01033.1
LytTr DNA-binding domain protein.
  
 0.768
EHH00668.1
Hypothetical protein.
       0.762
EHH00674.1
Outer membrane efflux protein.
 
     0.757
EHG98272.1
Hypothetical protein; KEGG: apb:SAR116_2160 4.4e-07 transcriptional regulator, AraC family.
 
 
 0.652
EHH00773.1
Transcriptional regulator, AraC family; KEGG: dfe:Dfer_1574 6.6e-61 histidine kinase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.628
EHH00599.1
Two component regulator propeller; KEGG: dfe:Dfer_0792 7.9e-33 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
  
 
 0.618
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.