STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00698.1ABC-2 type transporter; KEGG: har:HEAR2591 8.7e-36 rbbA; ribosome-associated ATPase K13926; Psort location: CytoplasmicMembrane, score: 10.00. (362 aa)    
Predicted Functional Partners:
EHH00697.1
KEGG: rcp:RCAP_rcc00618 4.5e-97 ABC transporter ATP-binding/permease K13926; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.997
EHG98769.1
ABC transporter, ATP-binding protein.
   
  0.934
EHH00696.1
Hypothetical protein; KEGG: apb:SAR116_2008 3.5e-05 secretion protein HlyD; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.926
EHH00695.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 0.00050 fadD; long-chain-fatty-acid--CoA ligase K12340; Psort location: Cytoplasmic, score: 8.96.
 
     0.923
EHG99768.1
KEGG: bfr:BF2156 1.4e-76 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.899
EHG99258.1
KEGG: bfr:BF2156 1.1e-81 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
      0.896
EHH00694.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
 
     0.887
EHH00699.1
ABC-2 type transporter; KEGG: bbt:BBta_3660 1.3e-34 ABC transporter permease ATP-binding protein K13926; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.876
EHH01001.1
ABC-2 type transporter.
  
     0.745
EHH01000.1
ABC-2 type transporter.
  
     0.741
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.