STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00740.1Hypothetical protein. (52 aa)    
Predicted Functional Partners:
EHH00739.1
Hypothetical protein.
       0.723
EHH00737.1
Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.703
EHH00738.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.524
EHH00735.1
KEGG: pru:PRU_1516 1.5e-40 group 2 family glycosyltransferase; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
       0.477
EHH00736.1
Glycosyltransferase, group 2 family protein; KEGG: bde:BDP_1843 3.7e-35 glycosyl transferase family 2; Psort location: CytoplasmicMembrane, score: 7.88; overlaps another CDS with the same product name.
       0.477
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.