STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00741.1Hypothetical protein; KEGG: fsu:Fisuc_2943 2.1e-11 glucuronoarabinoxylan endo-1,4-beta-xylanase. (523 aa)    
Predicted Functional Partners:
EHG99498.1
Hypothetical protein; KEGG: bpb:bpr_I1784 2.3e-13 xsa43I; xylosidase/arabinofuranosidase Xsa43I.
  
 
 0.779
EHG98955.1
Glycosyl hydrolase, family 88.
  
 
  0.752
EHH01665.1
Glycosyl hydrolase, family 88; KEGG: bsu:BSU30120 2.3e-21 yteR; unsaturated rhamnogalacturonyl hydrolase.
  
  
  0.695
EHG98956.1
Glycosyl hydrolase family 2, sugar binding domain protein; Belongs to the glycosyl hydrolase 2 family.
  
 
  0.680
EHH00627.1
Hypothetical protein; KEGG: bpb:bpr_I1784 2.4e-17 xsa43I; xylosidase/arabinofuranosidase Xsa43I; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 43 family.
 
 
  0.658
EHG98243.1
Hypothetical protein; KEGG: bpb:bpr_I1784 3.5e-20 xsa43I; xylosidase/arabinofuranosidase Xsa43I.
 
 
  0.650
EHG98592.1
KEGG: pru:PRU_0082 2.9e-273 putative beta-galactosidase; K12308 beta-galactosidase.
 
 0.635
EHG99302.1
Hypothetical protein.
  
     0.613
EHH00574.1
Heparinase II/III-like protein; KEGG: spj:MGAS2096_Spy0530 0.0045 oligohyaluronate lyase K06036.
  
  
  0.605
EHH00595.1
Fibronectin type III domain protein; KEGG: ddd:Dda3937_02798 6.4e-30 putative transmembrane protein; Psort location: Extracellular, score: 9.72.
  
     0.599
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.