STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00746.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (274 aa)    
Predicted Functional Partners:
EHH00747.1
Threonine/alanine tRNA ligase second additional domain protein; KEGG: dat:HRM2_40520 1.4e-28 alaS2; AlaS2; Psort location: Cytoplasmic, score: 9.97.
   
   0.796
EHH00745.1
Phosphoserine phosphatase SerB; KEGG: bvu:BVU_3158 3.7e-177 putative phosphoserine phosphatase; K01079 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 9.97.
       0.697
EHH00353.1
Vitamin B12 dependent methionine synthase, activation domain protein; KEGG: pdi:BDI_0415 1.7e-71 putative 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
    
  0.572
EHH00160.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.572
EHH00744.1
Hypothetical protein.
       0.459
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.