STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHH00289.1KEGG: uma:UM02510.1 0.0013 hypothetical protein; K01184 polygalacturonase; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 28 family. (478 aa)    
Predicted Functional Partners:
EHH00288.1
Fibronectin type III domain protein; KEGG: ddd:Dda3937_02798 4.7e-39 putative transmembrane protein; Psort location: Cytoplasmic, score: 8.96.
     0.839
EHH01081.1
Hypothetical protein.
  
  0.799
EHH00285.1
Hypothetical protein; KEGG: ddd:Dda3937_02798 4.8e-28 putative transmembrane protein.
 
     0.792
EHG99496.1
Hypothetical protein; KEGG: ddd:Dda3937_02798 1.1e-11 putative transmembrane protein.
 
  
  0.780
EHG98292.1
Putative bacteriochlorophyll 4-vinyl reductase; KEGG: ddd:Dda3937_02798 1.3e-19 putative transmembrane protein; Psort location: OuterMembrane, score: 9.52.
  
  
  0.749
EHH00721.1
Hypothetical protein; KEGG: ddd:Dda3937_02798 5.2e-22 putative transmembrane protein.
  
     0.748
EHG98567.1
Hypothetical protein; KEGG: ddd:Dda3937_02798 5.4e-30 putative transmembrane protein; Psort location: OuterMembrane, score: 9.49.
 
     0.740
EHH00105.1
Hypothetical protein; KEGG: ote:Oter_1931 0.0012 pectate lyase; Psort location: Cytoplasmic, score: 8.96.
  
  0.664
EHH00574.1
Heparinase II/III-like protein; KEGG: spj:MGAS2096_Spy0530 0.0045 oligohyaluronate lyase K06036.
  
  
 0.615
EHH01911.1
Glycosyl hydrolase, family 88; KEGG: rle:pRL120662 1.7e-48 ugl; putative unsaturated glucuronyl hydrolase; K01238; Psort location: Cytoplasmic, score: 9.97.
     0.601
Your Current Organism:
Paraprevotella clara
NCBI taxonomy Id: 762968
Other names: P. clara YIT 11840, Paraprevotella clara YIT 11840, Paraprevotella clara str. YIT 11840, Paraprevotella clara strain YIT 11840
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.